Links of Interest

Special Opportunities for High School Students

• Florida Junior Academy of Science


• University of Florida Center for Precollegiate Education & Training


• University of Florida Student Science Training Program


• Intel Education Initiative

High Quality Proteomics Services

• University of Florida Proteomics Facility, Interdisciplinary Center for Biotechnology Research (ICBR)

2-D PolyAcrylamide Gel Electrophoresis (PAGE)

• World 2-D PAGE: Index to Databases and Services


• Proteome 2-D PAGE: Database System for Microbial Research at Max Planck Institute for Infection Biology


• Human 2-D PAGE: Danish Centre for Translational Breast Cancer Research


• 2-D PAGE Database: Swiss 2-D PAGE


• Yeast Protein Map (France): Institut de Biochimie et Génétique Cellulaires


• Yeast 2-D PAGE (Sweden): Göteborgs University

Protein Cleavage

• Mass Spectrometry Digest: Protein Prospector, University of California, San Francisco


• Peptide Mass: Expert Protein Analysis System Proteomics Server, Swiss Institute of Bioinformatics


• Mass Spectrometric Analysis: General Protein/Mass Analysis for Windows (GPMAW)

Posttranslational Modification

• Predict potential protein posttranslational modifications; find potential single amino acid substitutions in peptides: FindMod, Expert Protein Analysis System Proteomics Server, Swiss Institute of Bioinformatics


• Predict the possible oligosaccharide structures that occur on proteins from their experimentally determined masses: GlycoMod, Expert Protein Analysis System Proteomics Server, Swiss Institute of Bioinformatics


• Scansite: Massachusetts Institute of Technology


• Neural network predictions for serine, threonine and tyrosine phosphorylation sites in eukaryotic proteins: NetPhos Server, Center for Biological Sequence Analysis, Technical University of Denmark


• Phosphorylation database: Eucaryotic Linear Motif Resource for Functional Sites in Proteins


• Find proteins by name or keyword: PlantsP, Functional Genomics of Plant Phosphorylation, Purdue University


• Database of Protein Post Translational Modifications: Delta Mass, Association of Biomolecular Resource Facilities

Biomolecular Interaction

• DIP Protein Interactions


• BluePrint Biomolecular Interaction


• Mint Molecular Interaction

Sequence Databases

• NCBI genomes


• NCBI nr


• NCBI dbEST


• MSDB (USA)


• MSDB (Europe)


• SwissProt (Expasy)


• SwissProt (EBI)

Protein Identification

• MultiIdent, TagIdent and PeptIdent


• PeptideSearch


• MOWSE


• Prowl


• Protein Prospector


• MASCOT


• Lutefisk


• MassSearch


• SEQUEST


• Sherpa

Journals

• Journal of Proteomics


• Proteomics


• Proteomics Clinical Applications


• Journal of Proteome Research


• Molecular and Cellular Proteomics


• Proteome Science


• Current Proteomics


• Journal of Proteomics and Bioinformatics


• Human Genomics and Proteomics


• Cancer Genomics and Proteomics


• Briefings in Functional Genomics and Proteomics


• Biochimica et Biophysica Acta - Proteins and Proteomics


• Comparative Biochemistry and Physiology Part D - Genomics and Proteomics


• Proteomics Virtual Journal


• The Internet Journal of Genomics and Proteomics


• Proteomics Weekly

Societies and Organizations

• American Society for Mass Sepctrometry


• Association of Biomolecular Resource Facilities


• British Society for Mass Spectrometry


• The Electrophoresis Society


• The Proteome Society


• The Protein Society


• The Swiss Proteomics Society


• ASBMB


• Proteome Sciences


• Proteomics SURF


• Spectroscopy in Proteomics


• Mass Spectrometry and Biotechnology Resource


• Mass Spectrometry Web Address


• ProteinScience.com


• Large Scale Biology


• NCBI


• European Bioinformatics Institute


• Swiss Institute of Bioinformatics

Other Useful Links

• Protein sequence and structure prediction


• 3D-pssm


• PROSITE (Expasy)


• Chen lab Research at UF


• PMCB Program at UF


• Genetics Institute at UF